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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916480.1_cds_XP_016466187.1_59064
CDS Infomation

[gene=LOC107788955] [db_xref=GeneID:107788955] [protein=pumilio homolog 23-like] [protein_id=XP_016466187.1] [location=join(77143..77285,77587..77950,78216..78512,78738..78905,79664..79807,80099..80218,80574..80759,81045..81193,81281..81463,81920..82244)] [gbkey=CDS]
Sequence

ATGGGCCGAAAGACGTCAAAAAAGCATGCTGGAGTTGATGTTGATAGTACTGTTGAAAGT
GTATCTGGAGGGATCGCCTATGGCAATGATAGATCTCGTAAGCCCGACAAGACAGCCCCT
GTTCCACAAACATCATTTCTCAGACAGCAGATTGATCCCGAGACTGCAAAATACTTTGCG
GAGATTGCTAATGCCATTGAAGGTACAGAAATTGACCCAGAGGAGCGGTCTGTCATTTGT
GGAAATGCATTGGAAGAAACCAGAGGGAAAGAAGCAGAACTTGCAACTGATTATATAATA
AGCCATACTTTGCAAACTCTACTTGAAGGTTGTTCTTTGGATCACCTTTGTAGTTTCCTT
CAGAGCTGTGCAAAGAATATCTCTCATATTGCAGCCGATAGATCAGGCTCTCATGTGGTC
GAAACAGCTTTAAAATCTCTATCTTATCACCTTCAGGAAAGTGAGAACCATTCTCTGATT
GAACAGGCTTTGATTAAAATTTGTAAGGCAATTGTTGTCAATCCTGTTGATATAATGTGC
AACTGCCATGGATCTCATGTGCTTCGGAGTCTTCTTTGCCTACTTAAAGGGGTGCCTTTA
GAAGAGTTCCATTCCACAAAGTCATCAGTTGTCTTGGCTGAACGCTTGAATCTCAGGACG
CCTCATGCAAAAGACAATGGCTCACTGCGGTTTCAGCAAATATTTCCTAATTTGCTTAAA
AATTTCGTATCAGAGATGTTAAATGCTGCCAGTGAAGACATTTCAAAACTTCAAACTAAT
CAATACAGCAGTTTAGTTCTGCAGACTGCTTTGAAATTATTGGCCGGAAATGAACTGGAA
TTGTTGCATTTAATTCGAGTTCTTCTTGGGAGCAGCGCTGAAAGTGCCAATACTGGAAAC
TTGTTAGAGGGAAAAACCATGAGAAACATTTCAAGGCTAGTGGAAGAAACTGCATACAGT
CATTTAATGGAGGTCATTGTGGAATTTGCTCCTGAAACATTGTACAGTGAGTTGTTAACA
AAAGTTTTCAGGAAGTCATTGTTTCGAATGTCATCTCATCACTGTGCGAACTTCGTCGTG
CAGGCTTTAGCATCTCAAGCCAAAAGTGAGGAACATATGGACTTGATCTGGGAGGAGCTT
GGGACAAAGTTTCGCGATCTTTTCGAAATGGGAAAGTCTGGAGTTGTTGCTTCTGTCCTT
GCTGCAACTCAAAGGCTCCACAGCCATGAACATGAGTGCTGTCAGGCCATTGCTGCCGCT
GTATGCACAGGGGATGAGTTTCCCAAGTATATCGTCCCCCGACTATTATTTCTTGAAAAT
TTCTTCTGCTCAGGAGACAAATCTAACTGGAGTTGGCCACAAGGAACAAAGATCCATGTA
GTTGGATCTCTGATTCTGCAGTCGGTATTTAGACTTCCCAGTGAACTCATACAGATCTAT
GTTACTAGTATCACATCTTTGGAAGAGCATCATGTTTTTGCGGCATCGAAAGATCCTAGT
GGTTCACGGGTCATTGAATCTTTCCTCAACTCGAATATATCGGCAAAGCAAAAAAGGAAG
TTAGTGGCCAAGCTTCGAGGACATTTTGGTGAGCTCTCAGTGCACCCATTTGGCTCATTT
ACAGTTGAAAAGTGTTTCACTGCTAGTAACTTGTCCCTGAGAGAAACAATAGTGTCGGAA
ATGCTACCTCTCCAATCAGAGCTATCCAAGACTAAGCAGGGACCTTACCTACTGAGGAAA
CTCGATATTGACGGATTTGCTAGGCAACCTGATCAGTGGAAGTCGAGACAAGCTTCACAA
CAATCTGCTCTCAAAGAATTTTATGCTACATTCGGACCAACGGAAACCAAATCACTTGTA
AAGGATAGCTTTCTTGCTGATACTCATTCCAAACCAAAGCAAGAAAAATTGAAAGATATT
AGGAAAGAGATCGAGACAACTTTGGCTTCTTCCAAAACTTCAAATACCCCCTTTTTGGCT
CATCAGGTTTCCAAAAAAGTGAAAAGGTCGAAAGATGAGAAGAAAAGGCATACGAGAGAT
GGTCAGTCAGAATCTCAAAGAAAGAAGATTAAAGTTTAA

Peptide Sequence

PEP ID

XP_016466187.1
PEP Infomation

PREDICTED: pumilio homolog 23-like [Nicotiana tabacum]
Sequence

MGRKTSKKHAGVDVDSTVESVSGGIAYGNDRSRKPDKTAPVPQTSFLRQQIDPETAKYFA
EIANAIEGTEIDPEERSVICGNALEETRGKEAELATDYIISHTLQTLLEGCSLDHLCSFL
QSCAKNISHIAADRSGSHVVETALKSLSYHLQESENHSLIEQALIKICKAIVVNPVDIMC
NCHGSHVLRSLLCLLKGVPLEEFHSTKSSVVLAERLNLRTPHAKDNGSLRFQQIFPNLLK
NFVSEMLNAASEDISKLQTNQYSSLVLQTALKLLAGNELELLHLIRVLLGSSAESANTGN
LLEGKTMRNISRLVEETAYSHLMEVIVEFAPETLYSELLTKVFRKSLFRMSSHHCANFVV
QALASQAKSEEHMDLIWEELGTKFRDLFEMGKSGVVASVLAATQRLHSHEHECCQAIAAA
VCTGDEFPKYIVPRLLFLENFFCSGDKSNWSWPQGTKIHVVGSLILQSVFRLPSELIQIY
VTSITSLEEHHVFAASKDPSGSRVIESFLNSNISAKQKRKLVAKLRGHFGELSVHPFGSF
TVEKCFTASNLSLRETIVSEMLPLQSELSKTKQGPYLLRKLDIDGFARQPDQWKSRQASQ
QSALKEFYATFGPTETKSLVKDSFLADTHSKPKQEKLKDIRKEIETTLASSKTSNTPFLA
HQVSKKVKRSKDEKKRHTRDGQSESQRKKIKV

Transcript Sequence

Gene sequence data has not been registered.